Pampa
pampa
web server
help
retrieve result with an ID
Name of the job
(optional) :
Mass spectra
Upload
your MS spectra files in CSV, MGF or mzML format (or in a .ZIP archive)
pampa_example_1.zip
Mass error
Optimize for MALDI-TOF spectra
Optimize for MALDI-FTICR spectra
Custom value in ppm
Custom value in Daltons
Basic mode
Advanced mode
Advanced mode allows you use your own markers or sequences and taxonomy.
Organisms and marker peptides
Choose
one or several taxonomic classes :
Mammals
or
Select
a set of organisms :
PTMs :
Include deamidations
Organisms and peptide markers
Upload one or several peptide table(s)
or
Upload a set of protein sequences for in silico digestion
Taxonomy
Use NCBI taxonomy
Provide no taxonomy
Upload your own taxonomy
Results
Only optimal results
Near-optimal results within a suboptimality percentage :
All results within a suboptimality percentage :