PAMPA fillin

Use this form to supplement an existing peptide table by adding missing information such as peptide sequence, mass, position, taxonomic rank, digestion status, etc. More...


Name of the job (optional) :

Peptide table

Upload the peptide table to complete

Target sequences

Upload the FASTA files for your species of interest.

Upload a limit file (optional, doc : https://github.com/touzet/pampa/wiki/Limiting-searches).

Parameters for in silico digestion

Choose your digestion enzyme.
Enter the maximal peptide length.
Enter the minimal peptide length.
Enter Maximal number of missed cleavage sites

Error margin tolerance (optional) :

Enter the margin error tolerance.

Taxonomy

use NCBI taxonomy
use no taxonomy
upload your own taxonomy